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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015856268.1_cds_XP_016513088.1_25665
CDS Infomation

[gene=LOC107830121] [db_xref=GeneID:107830121] [protein=serine/threonine-protein kinase HT1-like] [protein_id=XP_016513088.1] [location=complement(join(1213..1578,1761..1919,1996..2117,2256..2451,2742..2874,4787..4989))] [gbkey=CDS]
Sequence

ATGGCTGATGAAAAGGGTATTCCAAATCTTGAACGTTCTCTCTCTACCCCATCAGAGAAA
CTTATCGACGGTCCAAAGGGTGACAATCTTGATGCCCAAAATGTTACTATCAGTATTGAC
AAGAAGCTACTGATCGATTTACAGCAGCTTTCAATTGGGCCTATTATCAGTGAAGCTCAT
TATTCTGTGGTTTACCAAGGATTATATAAATCCCTGCCTGTTGCGATAAAAGTTATACAG
CCAGAGAAATCCTCAAATGTAAGTCCTGAGAGGAAGGTGAAATTTGAGAGGGAAATTACG
ATGCTATCTAGAGTGAAGCATGACAGCATTGTGAAGTTTATTGGTGCCTCCACGGAACCA
GCGTTGATATTAGTCACAGAGTTAATGAAAGGTGACACACTTCAGAAGTACCTGTGGAGC
ATCCGACCACATTGTCCGGATTTCAACCTTTCTCTAAGTTTTGCATTGGGAATTTCTCGG
GCAATGGAGTATTTGCATGCAATTGGCATCATTCACCGTGATCTGAAGCCAAGTAATCTA
CTCCTCACAGAAGACAAGACAAGAATTAAACTAGCTGACTTTGGGTTAGCTAGGGTGGTG
GCAGAAACTGAAATGACCGCAGAAGCTGGTACATACCGCTGGATGGCTCCTGAGTTATTG
TACACAGAACCAGCTGATTATGGGGTGAAGAAGAAACACTACAATCATAAAGTAGATGTC
TACAGTTTCTCGATGGTTCTATGGGAGCTACTCACCAACGACACTCCATTCAAGGGAAAA
ACCGACATAATGGCAGCGAATGCTACAGCTAAAAATTTAAGGCCTAGCACGGATAACATT
CCTAAGGACATTGTACCTCTCATTAGCTCCTGCTGGTCGGAGGATCCAGCAGATCGACCA
GAATTTGCGCAAATATCAGATATCCTTGCAAACATCCTTGGCGATGCATATATTCAGCAG
ACGATAACGCCAAATCTTTCTGAGGGGAAGCAGCCTGCTGCATATACTCCGCAAACGATA
ACTCCAAATCTCTCTGACAAGGATCAATCTACGAGCGAAGAGATTGCTAATTCTTCTGGC
ACCAACAATTTGATGGATAAGAGTGCAGAAAATAAGAAGAAGAAAAGCAAGAGTTGGTTA
TGCTGTTTCAAGAGTGGCTACAATGACAATCTCCAATAA

Peptide Sequence

PEP ID

XP_016513088.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase HT1-like [Nicotiana tabacum]
Sequence

MADEKGIPNLERSLSTPSEKLIDGPKGDNLDAQNVTISIDKKLLIDLQQLSIGPIISEAH
YSVVYQGLYKSLPVAIKVIQPEKSSNVSPERKVKFEREITMLSRVKHDSIVKFIGASTEP
ALILVTELMKGDTLQKYLWSIRPHCPDFNLSLSFALGISRAMEYLHAIGIIHRDLKPSNL
LLTEDKTRIKLADFGLARVVAETEMTAEAGTYRWMAPELLYTEPADYGVKKKHYNHKVDV
YSFSMVLWELLTNDTPFKGKTDIMAANATAKNLRPSTDNIPKDIVPLISSCWSEDPADRP
EFAQISDILANILGDAYIQQTITPNLSEGKQPAAYTPQTITPNLSDKDQSTSEEIANSSG
TNNLMDKSAENKKKKSKSWLCCFKSGYNDNLQ

Transcript Sequence

Gene sequence data has not been registered.